Selected Publications

Kim K, Zhao R, Doi A, Ng K, Unternaehrer J, Cahan P, Hongguang H, Loh YH, Aryee MJ, Feinberg AP, Daley GQ. Tissue of origin distinguishes the epigenome and differentiation potential of human induced pluripotent stem cells. Nature Biotech. In final revision (2011). Kim K, Zhao R, Doi A, and Ng K share co-first-authorship.

Ji H, Ehrlich LI, Seita J, Murakami P, Doi A, Lindau P, Lee H, Aryee MJ, Irizarry RA, Kim K, Rossi DJ, Inlay MA, Serwold T, Karsunky H, Ho L, Daley GQ, Weissman IL, Feinberg AP. Comprehensive methylome map of lineage commitment from haematopoietic progenitors. Nature. 2010 Sep 16;467(7313):338-42.

Kim K, Doi A, Wen B, Ng K, Zhao R, Cahan P, Kim J, Aryee MJ, Ji H, Ehrlich LIR, Yabuuchi A, Takeuchi A, Cunniff KC, Hongguang H, Mckinney-Freeman S, Naveiras O, Yoon TJ, Irizarry RA, Jung N, Seita J, Hanna J, Murakami P, Jaenisch R, Weissleder R, Orkin SH, Weissman IL, Feinberg AP, and Daley GQ. Epigenetic memory in induced pluripotent stem cells. Nature. 2010 Sep 16;467(7313):285-90.

Loh YH, Agarwal S, Park IH, Urbach A, Huo H, Heffner GC, Kim K, Miller JD, Ng K, Daley GQ. Generation of induced pluripotent stem cells from human blood. Blood. 2009 May 28;113(22):5476-9.

Lu CW, Yabuuchi A, Chen L, Viswanathan S, Kim K, Daley GQ. Ras-MAPK signaling promotes trophectoderm formation from embryonic stem cells and mouse embryos. Nat Genet. 2008 Jul;40(7):921-6.

Kim K, Ng K, Rugg-Gunn PJ, Shieh JH, Kirak O, Jaenisch R, Wakayama T, Moore MA, Pedersen PA, and Daley GQ. Recombination signatures distinguish embryonic stem cells derived by parthenogenesis and somatic cell nuclear transfer. Cell Stem Cell. 2007 Sep 13;1(3):346-352. (Published with cover story.)

Lengerke C, Kim K, Lerou P, Daley GQ. Differentiation potential of histocompatible parthenogenetic embryonic stem cells. Ann N Y Acad Sci. 2007 Jun;1106:209-18.

Kim K, Lerou P, Yabuuchi A, Lengerke C, Ng K, West J, Kirby A, Daly MJ, Daley GQ. Histocompatible embryonic stem cells by parthenogenesis. Science. 2007 Jan 26;315(5811):482-6. (Published with cover story.)

Kim K, Angeletti PC, Hassebroek EC, Lambert PF. Identification of cis-acting elements that mediate the replication and maintenance of human papillomavirus type 16 genomes in Saccharomyces cerevisiae. J Virol. 2005 May;79(10):5933-42. Kim K and Angeletti PC share co-first-authorship.

Geijsen N, Horoschak M, Kim K, Gribnau J, Eggan K, Daley GQ. Derivation of embryonic germ cells and male gametes from embryonic stem cells. Nature. 2004 Jan 8;427(6970):148-54.

Kim K, Zhang Y, Roberts GP. Characterization of altered regulation variants of dinitrogenase reductase-activating glycohydrolase from Rhodospirillum rubrum. FEBS Lett. 2004 Feb 13;559(1-3):84-8.

Kim K, Garner-Hamrick PA, Fisher C, Lee D, Lambert PF. Methylation patterns of papillomavirus DNA, its influence on E2 function, and implications in viral infection. J Virol. 2003 Dec;77(23):12450-9.

Angeletti PC, Kim K, Fernandes,FJ, Lambert PF. Stable replication of papillomaviral genomes in Saccharomyces cerevisiae. J. Virol. 2002 Apr;76(7):3350-8. Angeletti PC and Kim K share co-first-authorship.

Kim K, Lambert FP. E1 protein of bovine papillomavirus 1 is not required for the maintenance of viral plasmid DNA replication. Virology. 2002 Feb 1;293(1):10-14.

Zhang Y, Kim K, Ludden P, Roberts GP. Isolation and characterization of draT mutants that have altered regulatory properties of dinitrogenase reductase ADP-ribosyltransferase in Rhodospirillum rubrum. Microbiology. 2001 Jan;147(Pt 1):193-202.

Do AND, Farrell L, Kim K, Nguyen ML, Lambert PF, Oncogenic Viruses. In Joshua Lederberg, ed. Encyclopedia of Microbiology, 2nd edition. San Diego: Academic Press, 2000: 456-465.

Kim K, Zhang Y, Roberts GP. Correlation of activity regulation and substrate recognition of the ADP- ribosyltransferase that regulates nitrogenase activity in Rhodospirillum rubrum. J Bacteriol. 1999 Mar;181(5):1698-702.